A community effort to collect a curated set of analysis pipelines built using Nextflow.

nf-core

<https://github.com/nf-core/test-datasets/pull/1980|#1980 Add hg38 cytoBand for telomerehunter module tests>
Pull request opened by <https://github.com/pinin4fjords|pinin4fjords>
*Summary*

• Adds the hg38 cytoBand file (`data/genomics/homo_sapiens/genome/cytoBand_hg38.txt`) downloaded from UCSC (`<http://hgdownload.cse.ucsc.edu/goldenpath/hg38/database/cytoBand.txt.gz`|hgdownload.cse.ucsc.edu/goldenpath/hg38/database/cytoBand.txt.gz`>)
• This file is needed by the telomerehunter nf-core module so that tests can supply the correct cytoband for hg38-aligned BAMs
• Without an explicit hg38 cytoband, telomerehunter defaults to its bundled hg19 version, which causes an `IndexError` when processing hg38 data

*Context*

This supports an upcoming PR to the nf-core/modules repo that adds a `cytoband` input channel to the telomerehunter module. The module tests need a reference cytoband file hosted here in test-datasets.
<https://github.com/nf-core/test-datasets|nf-core/test-datasets>

<https://github.com/nf-core/test-datasets/pull/1980|#1980 Add hg38 cytoBand for telomerehunter module tests>
Pull request closed by <https://github.com/pinin4fjords|pinin4fjords>
<https://github.com/nf-core/test-datasets|nf-core/test-datasets>