Hi all I am currently working on a Nextflow pipeline for prioritizing and reporting variants in pediatric oncology at the Children's Hospital in Zurich, Switzerland. Project is constantly changing, but If anyone is working on a similar project, I still would love to exchange ideas. (Possibly even at the hackathon? 😉 ) Best Linda

We are working on a variantinterpretation pipeline currently focusing on somatic variants at the center for integrative oncology in aachen, bonn and düsseldorf. You can have a look at it here: https://github.com/cio-abcd/variantinterpretation This is development in progress, we can exchange some ideas if you like.

We have one pipeline for variantprioritization which could also be helpful: https://github.com/qbic-pipelines/variantmtb