On a similar note on containers. Was the base imag...
# tools
h
On a similar note on containers. Was the base image changed on wave? I get new errors which I did not encountered before (kernel in quarto does not start, which could be an updated security config?)
m
How did you try to build them and when was the last time it was built before?
h
github.com/nf-core/modules/pull/13010 It's w.r.t to the one you helped merging locally. I use the wave containers (seqera.io/containers) page with the environment.yml. Then I update the main.nf container links.
m
you can now use
nf-core modules container create
(with nf-core tools 4.1.0). that uses a pixi template compared to the default conda template (that recently got an update)
h
If I try to update with
nf-core modules bump-versions
I get this. I will try the new container command and update nf-core tools from
3.5.2
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Module name                              │ Update message                                                                                 │
├──────────────────────────────────────────┼────────────────────────────────────────────────────────────────────────────────────────────────┤
│ vuegen                                   │ Ignoring mulled container
m
yep, you need 4.1.0