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nf-core

If I have a local module (or I guess a new nf-core one) and I put an `environment.yml` is there a command we have to generate and fetch the container links (singularity + docker) or is this still a manual step?

I think that only creates the new `yml` config format? I guess it can work if that’s properly supported now, but I’m yet to fully work it out

Does not work for local copies of `nf-core` modules in a pipeline (e.g. if I patch `environment.yml` :disappointed:

`nf-core modules container create` should work. What is happening when you do it?

```nf-core m container create annotsv/annotsv


                                          ,--./,-.
          ___     __   __   __   ___     /,-._.--~\
    |\ | |__  __ /  ` /  \ |__) |__         }  {
    | \| |       \__, \__/ |  \ |___     \`-._,-`-,
                                          `._,._,'

    nf-core/tools version 4.1.0 - <https://nf-co.re>


╭─ [!] Beta feature ─────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────╮
│ The nf-core modules containers commands are still in beta.                                                                                                                         │
│ Their behaviour and output may change in future releases.                                                                                                                          │
│ Best to always use the latest dev version.                                                                                                                                         │
╰────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────╯
ERROR    [Errno 2] No such file or directory: 'modules/annotsv/annotsv/main.nf'```

And if I don’t supply a module name and try to select one, I only get shown local modules