A community effort to collect a curated set of analysis pipelines built using Nextflow.

nf-core

Shoutout to <@U016SFULDB8> for having eyes on all module updates and trying to slim down the version parsing commands :party-claude:

Wasn't important before, but now it can make for really long lines

Beat me to it <@UQZG2UCF3> :sweat_smile: I was going to post the same..

I was thinking just yesterday, could we build an nf-core module plugin for dependabot that auto creates PRs for new versions?

That's exactly the plan: <https://nf-co.re/blog/2024/seqera-containers-part-2#automation---modules>

I'm a bit out of touch with the latest. Awesome!

CleanShot 2026-01-23 at 13.53.12@2x.png

This is the dream though, not sure if we'll ever get there or not, but having a fully automated system through bump, test and merge

Simon has been pestering me about most of my PRs in modules