I’m having a weird problem where I have a specific pipeline that doesn’t want to communicate with Seqera platform and allow itself to be monitored by it. I have many pipelines on the Platform and all of them I can monitor with the GUI except for one (see thread)

It looks like it's crashing before any tasks start running, which is probably why

The error here is a pipeline specific error. I think I had a database file misconfigured. But the upstream processes were submitted properly and working but nothing was being monitored.

I can see them being submitted, then being re-submitted. If they exit very quickly then it can be before they send any log updates back to platform.

Yes. From the logs

$ cat nf-4yC3wmZVWGZEQ5.log | rg 'exit: 0'
Jan-27 16:56:01.580 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993345; id: 3; name: PIPELINE_INITIALISATION:CHECK_NT_BLAST_TAXONOMY (NCBI_nt); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/96/586f5c10a09471c7c45793cf9717c6 started: 1769522156578; exited: 2026-01-27T13:55:57.433014768Z; ]
Jan-27 16:56:01.587 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993346; id: 1; name: PIPELINE_INITIALISATION:VALIDATE_TAXID (352914); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/5e/63324fa85ebde2aa6ca7c8ceaa8274 started: 1769522161584; exited: 2026-01-27T13:56:00.358787821Z; ]
Jan-27 16:56:06.579 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993352; id: 7; name: SANGERTOL_ASCC:ASCC:ORGANELLAR:ESSENTIAL_JOBS:FILTER_FASTA (asccTinyTest_V2_MITO); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/ee/53189f061504d092fd3104a4c7cda9 started: 1769522161614; exited: 2026-01-27T13:56:03.320466401Z; ]
Jan-27 16:56:06.583 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993353; id: 5; name: SANGERTOL_ASCC:ASCC:GENOMIC:ESSENTIAL_JOBS:FILTER_FASTA (asccTinyTest_V2_PRIMARY); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/7e/d24336adb1a7af46f1fe5b71f17522 started: 1769522166580; exited: 2026-01-27T13:56:06.228105299Z; ]
Jan-27 16:56:11.589 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993354; id: 6; name: SANGERTOL_ASCC:ASCC:GENOMIC:ESSENTIAL_JOBS:FILTER_FASTA (asccTinyTest_V2_HAPLO); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/80/4535b1f361c6a5b7b203af9b60479f started: 1769522171578; exited: 2026-01-27T13:56:09.216608775Z; ]
Jan-27 16:56:16.579 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993361; id: 2; name: PIPELINE_INITIALISATION:PREPARE_BLASTDB:CHECK_BARCODE (pacbio_adaptors.fa); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/38/3a8ca301c82c9aaeceb4b3718ac961 started: 1769522171602; exited: 2026-01-27T13:56:12.073891027Z; ]
Jan-27 16:57:36.583 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993497; id: 9; name: SANGERTOL_ASCC:ASCC:ORGANELLAR:RUN_FCSADAPTOR:FCS_FCSADAPTOR_EUK (asccTinyTest_V2_MITO); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/60/6e574b08e1918dc2ab6628588111dc started: 1769522176580; exited: 2026-01-27T13:57:35.752329248Z; ]
Jan-27 16:57:51.588 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993499; id: 13; name: SANGERTOL_ASCC:ASCC:GENOMIC:MITO_ORGANELLAR_BLAST:SED_SED (asccTinyTest_V2_PRIMARY); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/c9/01d4e064ab78a2a01e04d58e40ffac started: 1769522271585; exited: 2026-01-27T13:57:49.78672562Z; ]
Jan-27 16:57:56.587 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993500; id: 16; name: SANGERTOL_ASCC:ASCC:ORGANELLAR:ESSENTIAL_JOBS:GC_CONTENT (asccTinyTest_V2_MITO); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/4a/da1247f914cae7320405b337bc4477 started: 1769522271589; exited: 2026-01-27T13:57:53.053168505Z; ]
Jan-27 16:57:56.589 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993502; id: 15; name: SANGERTOL_ASCC:ASCC:GENOMIC:NR_DIAMOND:SEQKIT_SLIDING (asccTinyTest_V2_PRIMARY); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/29/1c3c632171bc8795ed6a88f75195d4 started: 1769522276587; exited: 2026-01-27T13:57:55.724705578Z; ]
Jan-27 16:58:01.668 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993503; id: 17; name: SANGERTOL_ASCC:ASCC:GENOMIC:ESSENTIAL_JOBS:GENERATE_GENOME:SAMTOOLS_FAIDX (asccTinyTest_V2_PRIMARY_filtered.fasta); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/37/6da99c6046c26e7af2b1d44f0f9956 started: 1769522281667; exited: 2026-01-27T13:57:59.74772508Z; ]
Jan-27 16:58:06.596 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993504; id: 20; name: SANGERTOL_ASCC:ASCC:GENOMIC:ESSENTIAL_JOBS:GC_CONTENT (asccTinyTest_V2_PRIMARY); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/5d/02048b5107cef687513ad769af2484 started: 1769522281675; exited: 2026-01-27T13:58:03.018801163Z; ]
Jan-27 16:58:06.605 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993506; id: 21; name: SANGERTOL_ASCC:ASCC:ORGANELLAR:ESSENTIAL_JOBS:GENERATE_GENOME:SAMTOOLS_FAIDX (asccTinyTest_V2_MITO_filtered.fasta); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/dd/2248767e86d4f63cdfb4c08fa5fbeb started: 1769522286598; exited: 2026-01-27T13:58:04.764693608Z; ]
Jan-27 16:58:16.607 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993508; id: 24; name: SANGERTOL_ASCC:ASCC:GENOMIC:RUN_FCSGX:SAMTOOLS_DICT (asccTinyTest_V2_PRIMARY_filtered.fasta); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/4b/7b8b7da0532f26208a1835c5128107 started: 1769522296587; exited: 2026-01-27T13:58:14.010746192Z; ]
Jan-27 16:58:26.589 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993509; id: 11; name: SANGERTOL_ASCC:ASCC:ORGANELLAR:TIARA_TIARA (asccTinyTest_V2_MITO); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/4d/d173b30782c2eae4c8e8a998e71e58 started: 1769522296608; exited: 2026-01-27T13:58:24.712568473Z; ]
Jan-27 16:58:31.589 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993510; id: 18; name: SANGERTOL_ASCC:ASCC:GENOMIC:TIARA_TIARA (asccTinyTest_V2_PRIMARY); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/0f/de9e0dae8ce98cbc076e8f2be904c3 started: 1769522301589; exited: 2026-01-27T13:58:28.585219754Z; ]
Jan-27 16:58:56.594 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993498; id: 10; name: SANGERTOL_ASCC:ASCC:ORGANELLAR:RUN_FCSADAPTOR:FCS_FCSADAPTOR_PROK (asccTinyTest_V2_MITO); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/28/0263e68a48f962fc2458acc01629c6 started: 1769522261583; exited: 2026-01-27T13:58:53.432443281Z; ]
Jan-27 16:59:01.681 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993513; id: 29; name: SANGERTOL_ASCC:ASCC:GENOMIC:EXTRACT_NT_BLAST:SEQKIT_SLIDING (asccTinyTest_V2_PRIMARY); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/9f/c550515e979aecfb521b9cad0f7754 started: 1769522336598; exited: 2026-01-27T13:58:56.828199852Z; ]
Jan-27 16:59:01.703 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993514; id: 14; name: SANGERTOL_ASCC:ASCC:GENOMIC:UP_DIAMOND:SEQKIT_SLIDING (asccTinyTest_V2_PRIMARY); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/8e/e38de15160c479c527e9ab4cf53015 started: 1769522341687; exited: 2026-01-27T13:59:00.859837662Z; ]
Jan-27 16:59:51.594 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993511; id: 25; name: SANGERTOL_ASCC:ASCC:GENOMIC:RUN_FCSADAPTOR:FCS_FCSADAPTOR_PROK (asccTinyTest_V2_PRIMARY); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/76/5c6d4e86722bf268e0b65742b5adc6 started: 1769522306591; exited: 2026-01-27T13:59:48.369041837Z; ]
Jan-27 16:59:51.600 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993515; id: 30; name: SANGERTOL_ASCC:ASCC:ORGANELLAR:RUN_FCSGX:SAMTOOLS_DICT (asccTinyTest_V2_MITO_filtered.fasta); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/77/f5ea5987302bbd33ac2c0374cafddf started: 1769522391595; exited: 2026-01-27T13:59:50.94186441Z; ]
Jan-27 16:59:56.596 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993512; id: 26; name: SANGERTOL_ASCC:ASCC:GENOMIC:RUN_FCSADAPTOR:FCS_FCSADAPTOR_EUK (asccTinyTest_V2_PRIMARY); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/a8/8b4d14cae514712ddff0d6500a31d7 started: 1769522311591; exited: 2026-01-27T13:59:56.243288819Z; ]
Jan-27 17:00:01.594 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993520; id: 31; name: SANGERTOL_ASCC:ASCC:GENOMIC:EXTRACT_NT_BLAST:SEQKIT_SLIDING (asccTinyTest_V2_HAPLO); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/b1/a9cfb0e2de9bc4c0c6237116cdb362 started: 1769522396611; exited: 2026-01-27T13:59:56.860655566Z; ]
Jan-27 17:00:01.598 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993521; id: 32; name: SANGERTOL_ASCC:ASCC:GENOMIC:UP_DIAMOND:SEQKIT_SLIDING (asccTinyTest_V2_HAPLO); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/91/a899cba48b250a1bd75bf9d590e0c4 started: 1769522401596; exited: 2026-01-27T13:59:59.811783511Z; ]
Jan-27 17:00:06.596 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993523; id: 36; name: SANGERTOL_ASCC:ASCC:GENOMIC:RUN_FCSGX:SAMTOOLS_DICT (asccTinyTest_V2_HAPLO_filtered.fasta); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/e4/3bc96e11e1f734b5eefae5d025275f started: 1769522406594; exited: 2026-01-27T14:00:02.978718432Z; ]
Jan-27 17:00:11.596 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993527; id: 42; name: SANGERTOL_ASCC:ASCC:GENOMIC:NR_DIAMOND:SEQKIT_SLIDING (asccTinyTest_V2_HAPLO); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/17/8e102f296795f0af2d7f1e6d0eae54 started: 1769522406622; exited: 2026-01-27T14:00:06.77638623Z; ]
Jan-27 17:00:11.603 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993528; id: 43; name: SANGERTOL_ASCC:ASCC:GENOMIC:MITO_ORGANELLAR_BLAST:SED_SED (asccTinyTest_V2_HAPLO); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/5a/aa227f8085ae26baf477f6ddbfb0fb started: 1769522411597; exited: 2026-01-27T14:00:09.65451964Z; ]
Jan-27 17:00:16.595 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993525; id: 41; name: SANGERTOL_ASCC:ASCC:GENOMIC:TIARA_TIARA (asccTinyTest_V2_HAPLO); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/8e/c73247a52ed2f44260d99a9e1d667c started: 1769522406619; exited: 2026-01-27T14:00:12.163000018Z; ]
Jan-27 17:00:16.611 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[jobId: 44993529; id: 40; name: SANGERTOL_ASCC:ASCC:GENOMIC:ESSENTIAL_JOBS:GC_CONTENT (asccTinyTest_V2_HAPLO); status: COMPLETED; exit: 0; error: -; workDir: /ibex/project/c2303/work/e6/37cfc82a15433fe239a8db0174a1e9 started: 1769522411604; exited: 2026-01-27T14:00:12.991921353Z; ]

odd. And does this happen repeatedly or is it a one-off?

It’s only happened for this pipeline. Happens every time for it no matter how my configuration looks. Never happened for any other pipeline I’ve run on the Platform it always works excellently