Hi, I have probably a stupid question....I am researcher in immunolgy and, I am trying to install and use nf-core chip-seq for the first time. I succed to run the

nf-core/demo

with test data. But I don't find the results folder in my computer. Could you help me?

how did you run the demo pipeline?

I use a docker and

nextflow run nf-core/demo -profile test,<docker> --outdir results

Then it should be in a folder called

results

in your working dir, wherever you ran it

My problem is : I ma not able to identify my working dir with the nf core demo...

I use a docker

are you running nextflow inside docker?

yes

Right, yes you almost certainly don't want to do that

ok, thank you

I'd recommend going through the Nextflow Training (eg. Hello Nextflow): https://training.nextflow.io/latest/ It walks you through all of these concepts 🙂