Hi all, I want to add a small `test-dataset` for `...
# modules
m
Hi all, I want to add a small
test-dataset
for
nf-core/octopusv-merge
module that expects a slightly modified version of the standard VCF format called
.svcf
. I have an example from the authors of octopusv. Would 2 svcfs under
delete_me
be fine for now?
i
If it's really non-standard, you can put it in
delete_me
if you see no good place to put it (
genomics
would be better if it's from a real organism). The "for now" part hardly ever works, the files tend to stay there indefinitely.
m
Its not really a very different from a standard vcf. The tool expects 2 of these
.svcf
files, I wanted to use the truncated ones from the author of the tool. Should I place it here: test-datasets/data/genomics/homo_sapiens/genome/vcf at modules 路 nf-core/test-datasets
i
If they are based on some human data, I see no problem
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s
Please don't put anything in
delete_me
, find somewhere more appropriate to put it
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