NEXTFLOW 26.04 CHANGING THE STRUCTURE OF IT'S PIPE...
# rantsm
mashehu
05/05/2026, 3:01 PMNEXTFLOW 26.04 CHANGING THE STRUCTURE OF IT'S PIPELINE CACHE shakefistshakefistshakefistshakefistshakefistshakefistshakefistshakefistshakefistshakefistshakefistshakefist 😭
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Jose Espinosa-Carrasco
05/05/2026, 3:02 PMwhat do you mean?
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mashehu
05/05/2026, 3:03 PM Copy code
before 26.04.0 : ~/.nextflow/assets/nf-core/proteinfamilies
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with 26.04.0 : ~/.nextflow/assets/.repos/nf-core/proteinfamilies😱 2
shakefist 1
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Phil Ewels
05/05/2026, 3:42 PMFeature, not a bug
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mashehu
05/05/2026, 3:42 PMundocumented feature 😉
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Phil Ewels
05/05/2026, 3:42 PMIt uses git worktrees now - means you can run multiple different versions of the same pipeline at once on a single system
Phil Ewels
05/05/2026, 3:43 PMYou mean you didn't see line 162 of
changelog.txtPhil Ewels
05/05/2026, 3:44 PMPhil Ewels
05/05/2026, 3:45 PMWork originally started way back in Jan 2024, so it feels like a super old feature to me as we've been discussing it for so long 😅
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mashehu
05/05/2026, 3:45 PMyou mean line 216 then 😁
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Phil Ewels
05/05/2026, 3:45 PMOriginal issue / suggestion goes back to 2022
Phil Ewels
05/05/2026, 3:46 PMIt should all migrate etc. seamlessly though.
Phil Ewels
05/05/2026, 3:46 PMOh wait, does this affect #CE5LG7WMB somehow?
silentdiscreteapprovingnod 1
😆 4
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mashehu
05/05/2026, 3:46 PMtotally 😁
mashehu
05/05/2026, 3:46 PMthat's why I am ranting here
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