Hi all, I opened a PR and while `nf-core pipeline...
# help
k
Hi all, I opened a PR and while
nf-core pipeline lint
works well locally(v 3.5.2), it fails during the tests with:
Copy code
╭─ [✗] 2 Pipeline Tests Failed ────────────────────────────────────────────────╮
│                                                                              │
│ files_unchanged: assets/nf-core-chipseq_logo_light.png does not match the    │
│ template                                                                     │
│ files_unchanged: docs/images/nf-core-chipseq_logo_dark.png does not match    │
│ the template                                                                 │
│                                                                              │
╰──────────────────────────────────────────────────────────────────────────────╯
Not sure how to resolve it
d
This is an eternal problem. Add the paths to `.nf-core.yml`:
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lint:
  files_unchanged:
    - docs/images/nf-core-magmap_logo_light.png
    - docs/images/nf-core-magmap_logo_dark.png
    - assets/nf-core-magmap_logo_light.png
  nextflow_config:
    - config_defaults:
        - params.ncbi_genome_infos
...
k
Mhmm that didn't help
d
It helps for me. I added the third png today and the linting of that was skipped.
I think a
@nf-core-bot fix linting
comment at the PR is another option.
k
Or not just copying your paths but using the right ones for the pipeline... Time for the wrap up 😉
😆 1
Thanks for your help!