Tyler Stahl
02/04/2026, 4:19 PMmature_hairpin_genome are reads aligned to mature miRNA database + hairpin database + reference genome. A high mapping percentage of mature_hairpin_genome relative to mature and mature_hairpin would otherwise indicate that the majority of reads are mapping to regions of the genome outside of known mature miRNAs and precursorsTyler Stahl
03/03/2026, 5:28 PMmature_hairpin ? Or am I mistake again ?
bowtie-build --threads 12 hairpin.fa_igenome.fa_idx.fa bowtie/hairpin