<#1863 Add rgi card-data file> Pull request opened...
# test-data
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#1863 Add rgi card-data file Pull request opened by vinisalazar Hi, This PR also creates a
metagenomics
directory. Although there is already a
metagenome
directory under
data/genomics/prokaryotes/metagenome/
, there is a discussion in the
#modules
nf-core Slack channel to add more files for metagenomics testing. I propose that
metagenomics
should be a directory under the
data/
directory, at the same level as
genomics
and
metabarcoding
. The
prokaryotes
directory where it currently sits contains mostly WGS data for model organisms, which is a different scope. This PR introduces this change. I would like to follow up with additional PRs to move content from the
data/genomics/prokaryotes/metagenome
to this new directory, fix the corresponding tests, and add more files for metagenomic testing. cc @James Fellows Yates @prototaxites @SPPearce Best, Vini --- Summary of changes: • Add data for testing the rgi modules. See nf-core/modules#9873 for discussion. nf-core/test-datasets
Review on #1863 Add rgi card-data file Review comment by SPPearce on vinisalazar's pull request Can you also add details of the file you are adding into the messy section below. nf-core/test-datasets
Review on #1863 Add rgi card-data file Review approved by SPPearce on vinisalazar's pull request nf-core/test-datasets