GitHub
02/25/2026, 9:09 PMdelete_me vs which ones are in a directory according to the tool, so any advice would be appreciated.
Another question I went back and forth on is where to include small databases here. For instance, the pipeline will use a RGI database for AMR identification. Is it better for the test profile to point directly to where its hosted (https://card.mcmaster.ca/download/0/broadstreet-v4.0.1.tar.bz2) or is is better to vendor it here to be merciful to the McMaster servers?
nf-core/test-datasetsGitHub
02/26/2026, 7:41 AMGitHub
02/26/2026, 5:30 PM