<!channel> Please give me a nf core zoom on this message if you are planning on joining the nf-core March 2026 hackathon (https://nf-co.re/events/2026/hackathon-march-2026)

I will do one for taxprofiler

I might work on ampliseq and/or bacass. But its too early to tell what exactly at the moment. I can register a project once I decided 😉

We will probably do one for the Nextflow GCP plugin. (possibly another one too but that's still undecided)

I'll probably do one called "Trying to stop the hackathon infrastructure from crumbling to the floor in a pile of burning terraform configs" this is fine fire (joke notreallyjoking pleasedon'twritethatonthewebsite)

I'm planning to do one for viralrecon! I'm still talking with my supervisors about how to do it

proteinfamilies / proteinannotator / seqsubmit

We will work on seqsubmit

I will work on phaseimpute !

I will work on the quiz 😉

We will work on mspepid, trying to push it forward to a first dev-release.

I will work on variantbenchmarking

I will work on seqinspector and we are currently debating if it should be on-site in Uppsala or online, so people outside of Sweden can join. But there will be a group either way.

Is there anyone here around Heidelberg considering joining in-place? This year I dont have anyone to organise with :D

GCP plugin work (and potentially more!) with @Nicolas Vannieuwkerke in Brussels ! 😄

I will work on lsmquant (in tübingen and online) and already opened a PR to the website🙂

I would work on #C0775L31Q2G, would try to push it to first release

My goal is to integrate more GPU modules into the pipelines and, if possible, work on improving the documentation for GPU development.

I’ll be working on funcprofiler. If anyone here is in North Carolina I’m happy to organize a local hub. let me know!

We are coordinating with some colleagues, since attendees will have different levels of expertise. We might do modules but we have not yet decided.

OK then @Sofia Stamouli @Daniel Straub @Nicolas Vannieuwkerke @Sarai @Evangelos Karatzas @Martin Beracochea @Louis Le Nézet @Julian Uszkoreit @Kübra Narcı @Franziska Bonath @Carolin Schwitalla @AMMAR SABIR @Nick Waters could you all please make PRs onto the nf-core website with a Markdown file for each of your pipelines/projects, includeding a 'goal' 'descprtion' and 'task' section, and post the PR when it's ready here, and we can do rapid reviews for you. If you're not sure yet if it will be online/local hub feel free to put 'TBC' in location.

Already made one for #C07URFZF074..Will do so for #C084HP11VPF after its first release. And then coordinate with Martin for #C09F9HR0A9E

I'm just waiting for confirmation from Google, should be okay in one of the following days. I'll do the PR asap

@Sofia Stamouli @Daniel Straub @Nicolas Vannieuwkerke @Sarai @Martin Beracochea @Louis Le Nézet @Julian Uszkoreit @Kübra Narcı @Franziska Bonath @Carolin Schwitalla @AMMAR SABIR Reminder to post your website PRs here please 🙏

Will open a PR today

Local site has been added, just working out the details of the project. I'll add it this week

The registration form is going live today, like.. nowish

I will open PR soon, just wanted to clarify the tasks to offer

General advice to all: local site pages can always be updated, so it's best for us if it can be added ASAP - even if it's just a stub at this point.

We have the local site already in place -- I'll the seqsumit project one this week

Registration is now live, we'll need to update the reg form with local sites as we go. If you know yours is happening then feel free to say in this thread and we can update the reg form right away.

https://github.com/nf-core/website/pull/3772 will be happening.

lsmquant : https://github.com/nf-core/website/pull/3746

@Daniel Straub - added ✅

Here is mine ! https://github.com/nf-core/website/pull/3780

mspepid: https://github.com/nf-core/website/pull/3781

@Nicolas Vannieuwkerke @Sarai @Franziska Bonath @AMMAR SABIR Reminder 😉 I ask as once it's in I have one final task for everyone 😬

It is Matilda that put in the seqinspector PR

Thank you for the reminder @James Fellows Yates! I had a meeting today with my team to see how to organize the local node in Madrid for bacass and viralrecon! I'll be adding the local node today and the projects we will try to have them this week!

Would everyone be ok with having a hackathon project for topic migration in modules? Our attendees might have different levels of expertise and I want to have a project/issues that can be easily done by newcomers.

yes, we had this on a list of projects already from the core side, but never got added it seems. Please go ahead and thanks for leading

I will do the PR today, just trying to get some more information from other fellows in the project

I'll try and do it today

Brussels site project https://github.com/nf-core/website/pull/3797 https://github.com/nf-core/website/pull/3798

I created the local hub in madrid and the viralrecon project yesterday! 😊

https://github.com/nf-core/website/pull/3799/ nf-test dev project

https://github.com/nf-core/website/pull/3808 PR for evexplorer nf-core hackathon

Alright thank you very mcuh to all of @Evangelos Karatzas @Rayan Hassaïne @Nicolas Vannieuwkerke @Yuxin Ning @Sofia Stamouli @Sarai @Daniel Lundin @Lili Andersson-Li @Matthias De Smet @Martin Beracochea @Louis Le Nézet @Daniel Straub @Carolin Schwitalla @mashehu @Franziska Bonath @Kübra Narcı @Phil Ewels @Gary Burnett @Jonas S @Nick Waters @Julian Uszkoreit @AMMAR SABIR @Ken Brewer @Anabella Trigila @Usman ! YOUR FINAL TASK: we need project boards to with tasks for progress tracking, and make it easier for you to recruit potential team members 💪 Here are the instructions: 1. Prepare on your own repository (e.g. pipelines, modules, whatever), issues with a good description of what to do 2. Go to the Hackathon Mar. 2026 project board on Github: https://github.com/orgs/nf-core/projects/146 3. Post the issues on the relevant column on the 'Group overview' tab 4. Switch to the relevant tab for the group (e.g. Pipeline for pipeline-related projects) 5. Scroll to the bottom to 'No project' 6. Click on your issues, then on the issues window that opens, under the 'Projects' side bar, assign the 'Project' to your relevant hackathon project label Note: If you do NOT find a hackathon project label, please let me know so I can make it Note note: you can skip the project board entirely, and do everything on your own repo using the 'Projects' side bar, but we recommend doing 1-6 for the first few issues so you know the structure layout If you have any questions about the project board, feel free to ping me with any questions P.S. don't forget to register, even if you've put a project on the website! https://nf-co.re/events/2026/hackathon-march-2026#registration

@Danilo Di Leo ☝️

Done !

@Daniel_VM can you add your project too?

Wonderful thank you!

already done for nf-core/bacass 🙂

Where have yo uadded them?

I added it here: https://github.com/orgs/nf-core/projects/148

Ah! We need them on the public board ideally: https://github.com/orgs/nf-core/projects/146

oh! got it. I'll fixed it

Wonderful, thank you Daniel!

thanks for the reminder, I'll do it now 🙂

Just did.. we will create a few more tickets for seqsubmit today/tomorrow 🙂