Lucas Davey
12/03/2025, 6:00 PMhelp was specified on the command line or params file but is not declared in the script or config
Anyone know what this means? I followed the docs and am using nf-schema 2.6.1 and have
validation {
help {
enabled = true
}
}
In my config. The pipeline is quite large so it might be something else but am not sure what to look for. It started around the time I transitioned from NXF_VER=25.04.8 to 25.10.2Arthur
12/03/2025, 9:59 PMhelp parameter in your params block.
Certainly the nf-core/tools template still does.
And the error you are getting I believe is coming from the nextflow strict syntax which I am guessing disallows undefined params being passed.Lucas Davey
12/04/2025, 8:50 AMArthur
12/04/2025, 10:51 AMparamsHelp. @Nicolas Vannieuwkerke are the docs for help out of date here?Nicolas Vannieuwkerke
12/04/2025, 10:52 AMNicolas Vannieuwkerke
12/04/2025, 10:53 AMNicolas Vannieuwkerke
12/04/2025, 10:54 AMLucas Davey
12/05/2025, 10:09 AM