Famke Bäuerle
11/14/2025, 10:34 AMcallvariants when I run nf-test it tells me
│ Assertion failed: │
│ assert process.success
│ | | │ | false
│ VARLOCIRAPTOR_CALLVARIANTS │
│ Nextflow stdout:
│ ERROR ~ Script compilation error │
│ - file : /Users/famke/02-nf-core/modules/.<http://nf-test-b5316c7c5c8f21082b4f9fc81a8a70e5.nf|nf-test-b5316c7c5c8f21082b4f9fc81a8a70e5.nf> │
│ - cause: Unexpected input: '{' @ line 32, column 10. │
│ workflow { │ ^Simon Pearce
11/14/2025, 11:05 AM.map{ meta, bam, bai, candidates, fasta, fai, alignment_json -> meta, bam, bai, candidates, alignment_json, fasta, fai } should have [ ] around the second half?Simon Pearce
11/14/2025, 11:05 AMFamke Bäuerle
11/14/2025, 11:18 AMFamke Bäuerle
11/14/2025, 11:53 AMFamke Bäuerle
11/14/2025, 12:11 PM