Porting the conversation here:
<https://nfcore.sl...
# parabrickse
Eduard Casas
10/21/2025, 4:05 PMPorting the conversation here:
https://nfcore.slack.com/archives/CJRH30T6V/p1761060776603539
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Gary Burnett
10/30/2025, 1:03 PMHi Eduard. I have seen this SIGKILL error before when the instance doesn't have enough memory. This is true for some of the modules when running with the GitHub CI runner, as that uses a
g4dn.xlargee
Eduard Casas
10/30/2025, 8:13 PMI ended up fixing this by adding the flags '--memory=64g --memory-swap=64g' to the file: tests\config\nf-test.config line 83 (gpu {docker.runOptions))
Eduard Casas
10/30/2025, 8:26 PMI will make the contribution to either the parabricks/fq2bam config module or the nf-test.config to make sure this works in the future.