Hi, Jacob. cell_id is not needed for bulk Airrseqs. Could you please show me the whole error message?

Hi, thank you for replying. I have attached the entire log. The 'cell_id' error is found on line 2910

Hi Jacob, clonal analysis is not possible when providing only light-chain sequences as for bulk datasets, it is performed only on the heavy chains. You can skip the clonal analysis steps with

--skip_clonal_analysis

for your dataset. We'll also provide a better error message for this case to explain that.

Thank you for clarifying 😊