Hi I'm having an issue with validation some S3 fil...
# tools
n
Hi I'm having an issue with validation some S3 files in the CI runners: https://github.com/nf-core/tools/actions/runs/17612460923/job/50037810287?pr=3743 Anyone any idea what could be wrong? It works perfectly locally, this error pops up now that nf-schema correctly validates cloud storage files
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n
Oh interesting! I wonder why it worked locally tho without that option 🤔
s
Sarek is using it
n
lemme try that
m
it fails with the runners from
runsOn
but it was working on the previous runners
n
do we want this as default behaviour in the template? 🤔
m
I assume it is already
n
allright, people can still remove it again if it's breaking stuff
it's just for CI, should be ok
n
ah yes but this test just does
nextflow run
so it doesn't use that config
m
which config is available at the root level?
n
the
nextflow.config
I'll add it there with a check maybe
m
anyhow this config is unusable as it is TEMPLATE
n
true
m
interesting approach
n
it's hacky 😁
m
yeah
I would have add a profile for this to be honest
Actually I proposed that already: https://github.com/nf-core/configs/pull/549
n
We can still do that later 😛
m
but probably not at the right location
I wanted to put most of the config profiles in configs to be honest, I tend to be a bit too extreme sometimes
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n
Don't fix what doesn't need fixing 😉
m
meh, if we were never fixing things that don't need fixing, we would still be fishes in the sea
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n
also true 😛
m
constant refactoring is the way I code
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s
Sarek is using it
m
speaking of, I have a couple of PRs waiting for reviewers in #C05V9FRJYMV https://nfcore.slack.com/archives/C05V9FRJYMV/p1757506514220999 But everyone is MIA today
n
I'll see if I find some time for it, but can't promise anything
m
yeah, no worries, I am finding other tasks
but the PRs will keep on pilling
anyhow, now you know why I created #CQY2U5QU9
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n
I'm not surprised you are the creator of that channel 🤣