Hello! I would like to ask for feedback (not necessarily reviews) on this PR:
https://github.com/nf-core/genomeassembler/pull/171.
This PR is large and also kinda complicated (and not done,e.g. there are not tests yet etc), but I think it is a good idea to change how genomeassembler works to make it more useful as an "exploratory" tool. Essentially, this shifts how the parameters of the pipeline are set, from setting globals, to setting sample-wise parameters, although all parameters can still be set globally if there is no need for sample-specific settings.