A It
06/14/2025, 12:02 AMNFCORE_RNASPLICE:RNASPLICE:DEXSEQ_DEU:DEXSEQ_ANNOTATION (genes.gtf) terminated with an error exit status (1)
Command executed:
dexseq_prepare_annotation.py genes.gtf DEXSeq.gff
cat <<-END_VERSIONS > versions.yml
"NFCORE_RNASPLICERNASPLICEDEXSEQ_DEU:DEXSEQ_ANNOTATION":
htseq: $(python -c "import pkg_resources; print(pkg_resources.get_distribution('htseq').version)")
END_VERSIONS
Command exit status:
1
Command output:
(empty)
Command error:
INFO: Environment variable SINGULARITYENV_TMPDIR is set, but APPTAINERENV_TMPDIR is preferred
INFO: Environment variable SINGULARITYENV_NXF_TASK_WORKDIR is set, but APPTAINERENV_NXF_TASK_WORKDIR is preferred
INFO: Environment variable SINGULARITYENV_NXF_DEBUG is set, but APPTAINERENV_NXF_DEBUG is preferred
Traceback (most recent call last):