Any ideas as to the cause of this error?

Do you have some more information from the error message? @Jin Khoo should be back tomorrow, since she wrote the pipeline I guess the she is most qualified to help with that..

could u provide a bit more details of your run? was it with default parameter settings? which data type do u have?

Yes, I used mostly default parameter settings. My input included a modBam file of data that was run on a Pacbio machine we have here, and a .fasta file that is a human reference genome.

Hi! I'm having the same issue here