Ken Brewer
04/23/2025, 4:58 PMFor those who work on T cell receptor (TCR) data, the Fred Hutchinson Cancer Center and I just released some tools to help you compare TCRs across sequencing platforms.
TCRconvert (Python) and TCRconvertR (R) convert TCR gene names between 10X, Adaptive, and IMGT naming conventions.
Supports:
• V, D, J, and C genes
• Alpha-beta and gamma-delta TCRs
• Human, mouse, and rhesus macaque
Open to feedback, bug reports, or feature suggestions:
🔗 Python: GitHub | PyPI
🔗 R: GitHub | CRAN (edited)
Gisela Gabernet
04/23/2025, 8:56 PMMark Polster
04/24/2025, 7:00 AM