I'm having linting issues with the meta.yml of my module: The error message is " The meta.yml of the module gcta/gsmr is not valid: {'reference': {'type': 'file', 'description': 'Reference files (BED, BIM, FAM) for GCTA analysis', 'pattern': '*.{bed,bim,fam}', multiple': True}} is not of type 'array'. Check the entry for input. " The PR link is: https://github.com/nf-core/modules/pull/8140 Can anyone help me with that?

Did you try with

--fix

? Already I can see that your input/channel definitions are not nested correctly, and you have a random 'thread_id' thing at the end

Yes, I missed the double -- in the objects and a few more things. Sometimes you just need a good night of sleep to figure it out 😅