Hi everyone, may I ask about the results from nf-c...
# chipseq
k
Hi everyone, may I ask about the results from nf-core/chipseq? Here are the results from 2 replicates of TAZ IP. Are there any resources about these each output? I see some files are very similar to each other, so I'm not use about the differences. And if I have to pick the file which includes only intersect peaks from all replicates, Is it correct to pick "TAZ.consensus_peaks.bed" for downstream analysis? ├── TAZ.consensus_peaks.annotatePeaks.txt ├── TAZ.consensus_peaks.antibody.txt ├── TAZ.consensus_peaks.bed ├── TAZ.consensus_peaks.boolean.annotatePeaks.txt ├── TAZ.consensus_peaks.boolean.intersect.plot.pdf ├── TAZ.consensus_peaks.boolean.intersect.txt ├── TAZ.consensus_peaks.boolean.txt ├── TAZ.consensus_peaks.featureCounts.txt ├── TAZ.consensus_peaks.featureCounts.txt.summary └── TAZ.consensus_peaks.saf