Hi Everyone, We are trying to use the `--dbgap_key...
# fetchngs
a
Hi Everyone, We are trying to use the
--dbgap_key
parameter to download controlled access data from dbGaP. We get through prefetch process, and then fail on fasterqdump process. Here is the error.
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--perm requires a cloud instance identity, please run vdb-config --interactive and enable the option to report cloud instance identity.
• Nextflow version: 24.04.2 • fetchngs githash: 8ec2d934f9301c818d961b1e4fdf7fc79610bdc5 Is anyone successfully running this on AWS Batch that has ideas for us? Many thanks.
for future people, we solved this by changing the CUSTOM_SRATOOLSNCBISETTINGS template script.