Hi everyone, first of all, I’d like to say thank you to all of you for developing this pipeline! I am trying to run the riboseq pipeline via Cambridge HPC but I’m constantly getting errors. As I am aware there is a bug while using `--with_umi`option, hence, I did not include it in the code. However, the job was killed after running for a while and the error was

[SIGHUP handler] DEBUG nextflow.Session - Session aborted -- Cause: SIGHUP

Attached to this is my log file. It would be much appreciated if somebody could help me see where the problem is. Once again, thank you all so much for your hard work!

Sounds like the nextflow process was terminated externally.

Hi Jonathan, thanks for your reply. What do you think might lead to the termination by the HPC?