Hi Everyone, with the nf-core hackathon in approximately 2 weeks I was wondering if we could start discussing what we would like to aim to implement for the next release? Perhaps we first come up with an updated wishlist and then based on who is available during the hackathon decide on what should be prioritise?

Template update

Thank you Maxime! I was just reading up on what this actually means. Hope to have it worked out and sorted well before the hackathon

please don't hesitate to let me know if you struggle

I need to replace the preprocess_rnaseq subworkflow with its successor

fastq_qc_trim_filter_setstrandedness

, accounting for updates, we fixed a few bugs with that in

rnaseq

. Probably a couple of other housekeeping things as well. But in terms of new features I think you're best placed Jack! Making modules is always a good hackathon thing to do, since it allows people to get stuck in without having to grapple with workflow logic.

heya, i wasn't sure up until very recently if i can join the hackathon, but i will 🙂 in terms of modules we have the

ribowaltz

one already written up which could be worth including to boost up our QC/P-sites capabilities until we have a dedicated QC module. during the hackathon I am happy to work on a new module for QC also

@Jonathan Manning are you around for some work for on Ribo-seq at all?

Not really, I'll be helping with teaching the whole time 😞

that’s outrageous! 🙂

You know who to complain to 😉

harsh il?

Hi Everyone, I unfortunately did not make it and also had two unforeseen deadlines clash with the hackathon so I have made zero progress. Apologies!

We’ve missed you!