chipseq error and pipeline was terminated. What is the problem? Thanks.
ERROR nextflow.extension.OperatorImpl - @unknown
_java.lang.IndexOutOfBoundsException_: fromIndex = -1
at java.base/java.util.AbstractList.subListRangeCheck(AbstractList.java:505)at java.base/java.util.AbstractList.subList(AbstractList.java:497)at org.codehaus.groovy.runtime.DefaultGroovyMethods.getAt(DefaultGroovyMethods.java:7950)at org.codehaus.groovy.runtime.DefaultGroovyMethods.getAt(DefaultGroovyMethods.java:8198)at org.codehaus.groovy.runtime.dgm$356.doMethodInvoke(Unknown Source)at org.codehaus.groovy.vmplugin.v8.IndyInterface.fromCache(IndyInterface.java:321)
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Jose Espinosa-Carrasco
07/12/2024, 8:09 AM
Might be that your samplesheet is not well formatted, see this thread, but it is difficult to say if you do not share more info