Conflict between

nf-core lint

and `pre-commit`… I have a parameter that takes a numerical value between 0 and 1. Its default is 10⁻⁵. If the value is not identical in

.nextflow.config

and

nextflow_schema.json

, I get an

nf-core lint

error. If I represent it as

1e-5

or

0.00001

, then it is changed to

1e-05

by

nf-core lint

in

nextflow_schema.json

and I get an error. If I change it to ``1e-05`` in both files, I get a

pre-commit

error as

prettier

changes the values in the schema file to be

1e-5

. How can I solve that problem?

Ooh, that's a new one!

Not a new one, I think we had it in #C02K5GX2W93 a while ago... @Jasmin Frangenberg @Anan Ibrahim do you remember how we solved it?

I cannot find the PR that solved it (and neither the thread where we discussed it). I remember that you James solved it, but even in the "blame" view on Github I cannot find the change. This is our file, which works with notation like 1E-9 🤷 Maybe you can find a hint there @Charles Plessy?

I think it was @mashehu was involved... Unless it was something in tools or something?

True... But in tools would have solved it for everyone, no? 🤔 Hmm

I don't remember exactly is the problem 😬

Might the problem be the non-capital "e" in the number notation?

Thanks everybody, our

dev

branch now passes both tests with

1E-05

in

nextflow.config

and

0.00001

/

number

in

nextflow_schema.json

.

How on earth did you figure that one out @mashehu ? 😂

Looked at the file @Jasmin Frangenberg linked and it was there 😄

E