Does it exist any tooling for graphql-yoga/prisma that provides GUI for editing like graph.cool style?

Not yet https://github.com/prismagraphql/graphql-playground/issues/648

prisma console provides a data browser GUI that allows CRUD operations

Indeed, it depends whether you were talking about the schema editor or the data browser.

Schema editor

Then no, for now there is no ported version of the schema editor working with prisma