A community effort to collect a curated set of analysis pipelines built using Nextflow.

nf-core

:x: *sarek/test_full_aws* failed :crying_cat_face: *Run Name*
sarek_test_full_aws *Duration*
6h 7m 25s *Status*
:x: Failed *Error Message*
```Join mismatch for the following entries: key=[[id:HCC1395T_vs_HCC1395N, normal_id:HCC1395N, patient:HCC1395, sex:XX, tumor_id:HCC1395T, contamination:null, variantcaller:tiddit], HCC1395T_vs_HCC1395N.tiddit_sv_merge.vcf.gz] values=``` *Command Line*
```nextflow run '<https://github.com/nf-core/sarek>' -name sarek_test_full_aws -params-file '<https://api.cloud.seqera.io/ephemeral/kNxPm-GxF-3u7jRu-Rq6cg.json>' -with-tower -r dev -profile test_full_aws``` Nov 9, 2026 at 6:42 PM