Hey there!
depictio loading We built a dashboard for drop, and we would love your eyes on it
🔍
Genome browser (JBrowse 2), the main feature of 1.20: the candidate genes on one axis, with their reads.
Docs, with examples
Depictio (open source, from EMBL) turns the output of a workflow run into an interactive dashboard you can share, so nobody has to write a Shiny or Streamlit app for each project. Point a template at any run of a pipeline and you get the same dashboard, which you can edit (UI & YAML), version and comment.
🧬 The
drop dashboard template shows the candidate genes of aberrant expression, aberrant splicing and mono-allelic expression, each one opened on its reads in the genome browser.
🙌
Could you have a look? Tell us what is useful, what is misleading and what is missing, in
#C0AFS06G9HR (all templates and details there) or in the
drop GitHub discussion. Even one line helps, thank you!
@Nicolas Vannieuwkerke might interest you 🙂
> Illustration example (nf-core/riboseq dashboard, not drop data), more example in
https://nfcore.slack.com/archives/C0AFS06G9HR/p1793808884575879