Hi all, just a note that it appears Salmon changed how

--noLengthCorrection

behaves in the latest Rust-based release (v2.7.0), which appears to be the version used in the updated nf-core workflow: github.com/COMBINE-lab/salmon/issues/1243. We expect this will change Salmon output in 3' data (e.g., QuantSeq) but need to evaluate the results.

Well spotted, thanks for the report, I've raised the paired issue on rnaseq, hopefully we'll get an upstream fix quickly

Thanks @Jonathan Manning , I see that it’s now addressed, updating the issue you added for this workflow