❌ genomeassembler/test_full failed 😿 Run Name nostalgic_morse Duration 3h 24m 48s Status ❌ Failed Error Message

12:39PM INF [seqera-fusion] setting up AWS Batch spot instance monitoring provider=aws-batch
12:39PM INF [seqera-fusion] instance metadata ami-id=ami-0acc5dd6b31082def instance-id=i-0ecd12dde78effde3 instance-type=r6id.16xlarge
12:39PM INF [seqera-fusion] starting incremental snapshot timer interval=300000
WARNING: Python locale settings can't be changed
ERROR! File not found (reference_bam): /nf-core-awsmegatests/work/genomeassembler/work-dev/a5/500664fd475a61af4a2b4820cb564a/test_hifi_hifiasm_to_reference.bam
In case you have troubles running QUAST, you can write to <mailto:alexey.gurevich@helmholtz-hips.de|alexey.gurevich@helmholtz-hips.de>
or report an issue on our GitHub repository <https://github.com/ablab/quast/issues>
Please provide us with quast.log file from the output directory.
FUSION_GPU_USED=false
Fusion Info:
    available_disk: start:3.2TB, min:3.2TB, max:3.2TB, end:3.2TB
    clone_namespace: false
    download: 88.77MB, drops:0, skip:0, sync:0, req:3
    fusion_version: 2.5.14-20e904e
    kernel_version: 6.1
    max_open_files: 1048576
    upload: 0.00MB, drops:0, skip:0, sync:9, req:9

Command Line

nextflow run '<https://github.com/nf-core/genomeassembler>' -name nostalgic_morse -params-file '<https://api.cloud.seqera.io/ephemeral/RkU0n-UYZFaMIWVmMHVztQ.json>' -with-tower -r dev -profile test_full

Sep 9, 2026 at 12:40 PM