Hey everyone! I’m not sure if this is the appropriate place to ask, but we successfully ran an nf-core pipeline on our RNA-seq data. We’re quite new to this type of analysis and are struggling to interpret some parts of the MultiQC report generated from a subset of our RNA-seq data. Would anyone be willing to take a look? I can share some of the plots we have questions about in the thread. Thank you in advance!

There's quite a bit of documentation on the outputs: nf-co.re/rnaseq/3.26.0/docs/output