:x: sarek/test_full_germline_ncbench_agilent faile...
# sarek_devf
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08/10/2026, 11:15 AM❌ sarek/test_full_germline_ncbench_agilent failed 😿 Run Name
sarek_test_full_germline_ncbench_agilent Duration
1h 19m 57s Status
❌ Failed Error Message
Copy code
(more omitted..)
2026-08-10 11:14:47.344971: W tensorflow/compiler/tf2tensorrt/utils/py_utils.cc:38] TF-TRT Warning: Could not find TensorRT
2026-08-10 11:14:47.798132: W tensorflow/compiler/tf2tensorrt/utils/py_utils.cc:38] TF-TRT Warning: Could not find TensorRT
2026-08-10 11:14:47.768191: W tensorflow/compiler/tf2tensorrt/utils/py_utils.cc:38] TF-TRT Warning: Could not find TensorRT
2026-08-10 11:14:47.309312: W tensorflow/compiler/tf2tensorrt/utils/py_utils.cc:38] TF-TRT Warning: Could not find TensorRT
2026-08-10 11:14:48.225434: W tensorflow/compiler/tf2tensorrt/utils/py_utils.cc:38] TF-TRT Warning: Could not find TensorRT
2026-08-10 11:14:48.193934: W tensorflow/compiler/tf2tensorrt/utils/py_utils.cc:38] TF-TRT Warning: Could not find TensorRT
2026-08-10 11:14:48.266551: W tensorflow/compiler/tf2tensorrt/utils/py_utils.cc:38] TF-TRT Warning: Could not find TensorRT
2026-08-10 11:14:48.283929: W tensorflow/compiler/tf2tensorrt/utils/py_utils.cc:38] TF-TRT Warning: Could not find TensorRT
2026-08-10 11:14:48.367335: W tensorflow/compiler/tf2tensorrt/utils/py_utils.cc:38] TF-TRT Warning: Could not find TensorRT
2026-08-10 11:14:48.246613: W tensorflow/compiler/tf2tensorrt/utils/py_utils.cc:38] TF-TRT Warning: Could not find TensorRT
Traceback (most recent call last):
File "/tmp/Bazel.runfiles_1rct62dw/runfiles/com_google_deepvariant/deepvariant/make_examples.py", line 36, in <module>
from deepvariant import make_examples_core
File "/tmp/Bazel.runfiles_1rct62dw/runfiles/com_google_deepvariant/deepvariant/make_examples_core.py", line 55, in <module>
from deepvariant import sample as sample_lib
File "/tmp/Bazel.runfiles_1rct62dw/runfiles/com_google_deepvariant/deepvariant/sample.py", line 38, in <module>
from <http://third_party.nucleus.io|third_party.nucleus.io> import sam
File "/tmp/Bazel.runfiles_1rct62dw/runfiles/com_google_deepvariant/third_party/nucleus/io/sam.py", line 141, in <module>
from third_party.nucleus.util import utils
File "/tmp/Bazel.runfiles_1rct62dw/r... Copy code
nextflow run '<https://github.com/nf-core/sarek>' -name sarek_test_full_germline_ncbench_agilent -params-file '<https://api.cloud.seqera.io/ephemeral/ce0C2lK_lWB3P7GKiNMqLg.json>' -with-tower -r dev -profile test_full_germline_ncbench_agilent