A community effort to collect a curated set of analysis pipelines built using Nextflow.

nf-core

Hello! I am trying to run the nf-core/rnaseq pipeline and keep getting the following error, can someone please help me? I am relatively new to coding and have had a hard time finding the exact answer to what is wrong (see thread for code and error)

```(base) alharding@MacBook-Air-4 ~ % nextflow run nf-core/rnaseq \
    --input /Users/alharding/Desktop/nextflow/samplesheet.csv \
    --outdir /Users/alharding/Desktop/nextflow/ \
    --genome GRCh38 \
    -profile docker

 N E X T F L O W   ~  version 24.04.4

Launching <https://github.com/nf-core/rnaseq> [mad_moriondo] DSL2 - revision: b89fac3265 [master]

ERROR ~ Input length = 1

 -- Check script '.nextflow/assets/nf-core/rnaseq/main.nf' at line: 52 or see '.nextflow.log' file for more details```

I have received the same error when running on either docker or using conda. I went and checked line 52 and it says the following:

```// Validate input parameters
if (params.validate_params) {
    validateParameters()
}```

Hi Al, how does your samplesheet look? Is it matching the requirements of the documentation? It seems that the issue may lie there !