Hi everyone, I’m working on a pipeline and running into an issue where it gets stuck at the samtools index module. The .bam.bai file is actually present in the work directory, and when I print the output using

SAMTOOLS_INDEX.out.bai.view()

, it shows the correct path to the work directory (as you can see in the terminal screenshot). Despite this, the pipeline never completes. When I rerun the pipeline a new .bam.bai file is generated in a new work directory so the cashing is also not working. Has anyone else encountered this issue or have any insights on what might be causing it?