Franziska Bonath
08/29/2024, 7:59 AMFranziska Bonath
08/29/2024, 8:11 AMnf-core/seqinspector aims to become a pipeline specific for quality control of sequence data. Input is either fastq files or a run folder and output is one global MultiQC report and, if wished, MultiQC files of groups that are defined in the sample sheet.
By joining this group you can
1) add existing modules to a pipeline (beginner friendly)
2) write a new module of you preferred QC tool if it doesn’t exist yet (intermediate level).
3) Start with implementation of long read methods (we have only limited experience in the group, so help would be more than appreciated!).
4) work on display of the data in the MultiQC report
5) write documentation
Franziska Bonath
08/29/2024, 11:25 AM