Louis Le Nézet
02/05/2026, 5:21 PMtuple val("${task.process}"), val('glimpse2'), eval("GLIMPSE2_chunk --help | sed -n '/Version.*v/s/.*v\\([0-9.]*\\).*/\\1/p'"), topic: versions, emit: versions_glimpse2
But when I perform nf-core modules lint i got
<unknown>:1: SyntaxWarning: "\(" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\("? A raw string is also an option.
<unknown>:1: SyntaxWarning: "\(" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\("? A raw string is also an option.
How should I adress this ?
GLIMPSE2_chunk --help give
Singularity> GLIMPSE2_chunk --help
[GLIMPSE2] Split chromosomes into chunks
* Authors : Simone RUBINACCI & Olivier DELANEAU, University of Lausanne
* Contact : <mailto:simone.rubinacci@unil.ch|simone.rubinacci@unil.ch> & <mailto:olivier.delaneau@unil.ch|olivier.delaneau@unil.ch>
* Version : GLIMPSE2_chunk v2.0.0 / commit = 2.0.1 / release = 2023-06-06
* Citation : BiorXiv, (2022). DOI: <https://doi.org/10.1101/2022.11.28.518213>
* : Nature Genetics 53, 120–126 (2021). DOI: <https://doi.org/10.1038/s41588-020-00756-0>
* Run date : 05/02/2026 - 18:21:15Maxime Garcia
02/05/2026, 5:30 PM