Hi, our lab has been using Nextflow for ATAC-seq and CUT&RUN that was done with chicken embryos. I was wondering if it would be possible for Nextflow to host the latest genome (Galgal6) as opposed to Galgal4 which is the only reference genome available currently. Much appreciate any help on this. Thanks!

Which references do you need ?

The galgal6 reference genome. Thanks!

yeah, I gathered that you wanted galga6, sorry for not being clearer, what I meant was which build index do you need for this? This #C073ZDLNC92 project is still ongoing, and I'm trying to keep momentum while switching jobs

Hi, I am not really sure about this, but from the website I got this - GRCg6a. https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000002315.5/