#1138 Workaround for FCS-GX in Tree of Life pipelines at the Sanger Pull request opened by muffato We're unable to make FCS-GX run through Singularity. Our workaround is to use a bare-metal installation that is provided as a module. Conda works too but cannot be considered a fallback for singularity because the singularity profile does

conda.enabled = false

The

withName

rule is restricted to https://github.com/sanger-tol pipelines, which we control. --- name: New Config about: A new cluster config Please follow these steps before submitting your PR: • If your PR is a work in progress, include

[WIP]

in its title • Your PR targets the

master

branch • You've included links to relevant issues, if any Steps for adding a new config profile: • Add your custom config file to the

conf/

directory • Add your documentation file to the

docs/

directory • Add your custom profile to the

nfcore_custom.config

file in the top-level directory • Add your profile name to the

profile:

scope in

.github/workflows/main.yml

• OPTIONAL: Add your custom profile path and GitHub user name to

.github/CODEOWNERS

(

**/<custom-profile>** @<github-username>

) nf-core/configs