I am getting this error on the latest release of the pipeline (I also posted this to Github, issue 567): Command exit status: 1 Command output: ERROR: failed to parse CSV at line: 1, col: 1 This is my command: nextflow run ./scrnaseq/main.nf -profile singularity,gpu \ --input samplesheet.csv \ --protocol auto \ --genome GRCh38 \ --aligner cellrangermulti \ --outdir outdir \ --gtf gencode.v49.annotation.gtf \ --cellranger_multi_barcodes multi_barcodes.csv \ --gex_target_panel Chromium_Human_Transcriptome_Probe_Set_v2.0.0_GRCh38-2024-A.csv \ --gex_reference_version GRCh38 \ --skip_cellrangermulti_vdjref \ -resume I suspect there is an issue with script in creating the proper config file for cellrangermulti: scrnaseq/modules/nf-core/cellranger/multi/templates/cellranger_multi.py