I tried just bumping the version of the tool to 6....
# modules
n
I tried just bumping the version of the tool to 6.0.8 and the issue is the same: github.com/nf-core/…/85955426750?pr=12270
m
you could switch to seqera containers than they start from the same environment.yml (build a seqera container for it (either via the seqera web gui (https://nf-co.re/docs/developing/containers/seqera-containers) or the new
nf-core modules container create
command (in the current dev branch of nf-core tools (
installed via pip install --upgrade --force-reinstall git+<https://github.com/nf-core/tools.git@dev>
))
n
Will those containers stick around? When I've built wave containers in the past it seemed like they were only retained for a few days.
m
did you build them with
--freeze
? we will slowly start moving most modules there, so it should stick around
n
oo I did not use --freeze. I'll give it a go, thanks!
m
(I would highly recommend the
modules container
command, because it removes the hassle with getting the right https link for singularity etc (and is faster because it sends all image requests in parallel)
🙏 1