Hi, I'm trying to run star_salmon with GRCz10 but ...
# rnaseq
p
Hi, I'm trying to run star_salmon with GRCz10 but salmon quant always runs out of memory. I've tried up to 128 GB of RAM but still triggers a bad_alloc(). Have you experienced the same? At the moment, the only workaround is to run it with pseudo_aligner salmon. Thanks!
j
I'm off today, but if you file an issue on the repo with a reproducible example I'll take a look this week.
p
Ok, thanks!