:x: sarek/test_full_germline_aws failed :crying_ca...
# sarek_devf
Full test notifications
06/12/2026, 11:20 PM❌ sarek/test_full_germline_aws failed 😿 Run Name
sarek_test_full_germline_aws Duration
4h 20m 16s Status
❌ Failed Error Message
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(more omitted..)
2026-06-12 23:19:39.485353: I tensorflow/core/platform/cpu_feature_guard.cc:182] This TensorFlow binary is optimized to use available CPU instructions in performance-critical operations.
To enable the following instructions: AVX2 AVX512F AVX512_VNNI FMA, in other operations, rebuild TensorFlow with the appropriate compiler flags.
2026-06-12 23:19:40.279087: W tensorflow/compiler/tf2tensorrt/utils/py_utils.cc:38] TF-TRT Warning: Could not find TensorRT
I0612 23:19:41.488984 140096742867392 run_deepvariant.py:635] Creating a directory for intermediate results in tmp
***** Intermediate results will be written to tmp in docker. ****
I0612 23:19:41.489523 140096742867392 run_deepvariant.py:838] env = {'R_PROFILE_USER': '/.Rprofile', 'FUSION_LICENSE_TOKEN': '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... Copy code
nextflow run '<https://github.com/nf-core/sarek>' -name sarek_test_full_germline_aws -params-file '<https://api.cloud.seqera.io/ephemeral/o7m0fi7DbcLaqzNEfIGdPA.json>' -with-tower -r dev -profile test_full_germline_aws2 Views