A community effort to collect a curated set of analysis pipelines built using Nextflow.

nf-core

<https://github.com/nf-core/test-datasets/pull/2102|#2102 Mifaser fix paths>
Pull request opened by <https://github.com/nickp60|nickp60>
:face_palm:
When testing locally I didn't realize that <https://github.com/nf-core/test-datasets/pull/2101/commits/2603c74678baf030e4c21933104e33a477ba319a|2603c74> reverted the intended change. Tested it correctly for this version.
<https://private-user-images.githubusercontent.com/14367274/606666121-345f0a09-f714-4618-b0a4-b90d5be6b38a.png?jwt=eyJ0eXAiOiJKV1QiLCJhbGciOiJIUzI1NiJ9.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.TTYREOhbOxgmcn6Nvmb81z0WeLJmngOGHZRLx_3Y4Bo|Screenshot 2026-06-11 at 4 14 06 PM> 
<https://github.com/piplus2|@piplus2> could you take a quick look when you get the chance? Sorry for the headache
<https://github.com/nf-core/test-datasets|nf-core/test-datasets>

Review on #2102 Mifaser fix paths
Review approved by <https://github.com/piplus2|piplus2> on <https://github.com/nickp60|nickp60's> pull request
The only thing I'd add is removing the tmpdir where you clone, if keeping it is not intentional.
<https://github.com/nf-core/test-datasets|nf-core/test-datasets>

<https://github.com/nf-core/test-datasets/pull/2102|#2102 Mifaser fix paths>
Pull request merged by <https://github.com/nickp60|nickp60>
<https://github.com/nf-core/test-datasets|nf-core/test-datasets>