A community effort to collect a curated set of analysis pipelines built using Nextflow.

nf-core

:x: *createpanelrefs/test_full* failed :crying_cat_face: *Run Name*
festering_kimura_2 *Duration*
1h 35m 36s *Status*
:x: Failed *Error Message*
```12:32PM INF [seqera-fusion] setting up AWS Batch spot instance monitoring provider=aws-batch
12:32PM INF [seqera-fusion] instance metadata ami-id=ami-0acc5dd6b31082def instance-id=i-0fc0777c66c2e4720 instance-type=c6id.8xlarge
12:32PM INF [seqera-fusion] starting incremental snapshot timer interval=300000
12:37PM INF [seqera-fusion] sending incremental snapshot signal (SIGUSR1)
12:42PM INF [seqera-fusion] sending incremental snapshot signal (SIGUSR1)
12:47PM INF [seqera-fusion] sending incremental snapshot signal (SIGUSR1)
12:52PM INF [seqera-fusion] sending incremental snapshot signal (SIGUSR1)
12:57PM INF [seqera-fusion] sending incremental snapshot signal (SIGUSR1)
1:02PM INF [seqera-fusion] sending incremental snapshot signal (SIGUSR1)
1:07PM INF [seqera-fusion] sending incremental snapshot signal (SIGUSR1)
FUSION_GPU_USED=false
1:10PM ERR [seqera-fusion] cannot upload part copy error="operation error S3: UploadPartCopy, https response error StatusCode: 400, RequestID: VRT6C6S5NXABG7B6, HostID: pCVeIRWjaW6fgRn2nEAT6TLLGujHiajNyriKWCQUIT0masJoC7fd8lK0j08nFTcA3ruCpotRyp4=, api error InvalidRequest: The specified copy source is larger than the maximum allowable size for a copy source: 5368709120" goid=188149 id=/s3/nf-core-awsmegatests/work/createpanelrefs/work-dev/26/2da35f670ba27e20c01f4b78248ea7/NA12878.bam length=40533753856 offset=0
1:10PM ERR [seqera-fusion] cannot upload part copy error="operation error S3: UploadPartCopy, https response error StatusCode: 0, RequestID: , HostID: , canceled, context canceled" goid=188174 id=/s3/nf-core-awsmegatests/work/createpanelrefs/work-dev/26/2da35f670ba27e20c01f4b78248ea7/NA12878.bam.d8jbef807fsc75bk05q0.43754979328.d8jbcm807fsc75bk01qg.chk length=134217728 offset=0
1:10PM ERR [seqera-fusion] cannot upload part copy error="operation error S3: UploadPartCopy, https response error StatusCode: 0, RequestID: , HostID: , canceled, context canceled" goid=188154 id=/s3/nf-core-awsmegatests/work/createpanelrefs/work-dev/26/2da3...``` *Command Line*
```nextflow run '<https://github.com/nf-core/createpanelrefs>' -name festering_kimura_2 -params-file '<https://api.cloud.seqera.io/ephemeral/7Rz29GBcHxkK5mmrCYNKIQ.json>' -with-tower -r 236c3d0eca4b5908f65b2f70bf4dbb937f742333 -profile test_full -resume a1706507-e102-4af8-a2dc-b1d524cb041c``` Jun 8, 2026 at 1:11 PM