Hi, I'd like to push airrflow container to <quay.i...
# request-coreh
Huimin Lyu
05/29/2026, 3:17 PMHi, I'd like to push airrflow container to quay.io/nf-core for our new release but I need permission first. Could anyone authorize me?
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Phil Ewels
05/29/2026, 8:41 PMNo, it needs to be done by someone in the core team
Phil Ewels
05/29/2026, 8:41 PMThis channel has preset forms to send messages. One of them is to request an image
Phil Ewels
05/29/2026, 8:41 PMBasically you push somewhere else and we pull + push for you
Phil Ewels
05/29/2026, 8:41 PMAnd you justify why it needs to be there
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Huimin Lyu
06/01/2026, 2:16 PMOur docker image is here: docker.io/immcantation/airrflow:5.1.0 Friederike reviewed our pull request for new release and suggested to "push this container to quay.io/nf-core" @Phil Ewels
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Phil Ewels
06/01/2026, 2:39 PMThis is what I mean about filling out the form, for next time..
Phil Ewels
06/01/2026, 2:39 PM@Rike Hanssen are you happy for a custom container here?
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Rike Hanssen
06/02/2026, 8:01 AM@Gisela Gabernet @Huimin Lyu any reason this can't be in bioconda?
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Gisela Gabernet
06/02/2026, 1:25 PMYes, it has been a >2y fight with conda-forge and bioconda and not solved yet. 2 R packages in the container were initially on conda-forge but had to be moved to bioconda due to biocontainer dependencies. Since the strict-channel thing was introduced, the older versions on conda-forge are always preferred and we cannot create a recipe with the new ones (there are inter-dependencies between these R packages). I have asked to archive the conda-forge recipe but there doesn't seem to be a process for that: https://github.com/conda-forge/r-alakazam-feedstock/issues/27. Formalized transfers from conda-forge to bioconda are not yet in place: https://github.com/conda-forge/cfep/pull/52
meow tableflip 1
Gisela Gabernet
06/02/2026, 1:27 PMIt's a bit frustrating TBH, it seems like a pretty common case they should be encountering. I'd be the happiest if we can push for this to be implemented, as I'd like to simply be able to create conda environments with these tools, which is at the moment not possible with their latest versions
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Rike Hanssen
06/02/2026, 4:29 PMok sounds like a good enough reason for me to upload to quay.io for now then
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Rike Hanssen
06/02/2026, 4:29 PM@Chris Hakkaart tagging you in
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Chris Hakkaart
06/03/2026, 6:18 AMSorry, all - only noticed this now. I'll upload tomorrow.
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Huimin Lyu
06/04/2026, 1:09 PMHi @Chris Hakkaart, is the airrflow docker image available at quay.io/nf-core now?
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